Stucture of Proteins
The most basic level of protein structure, called the primary structure, is the linear sequence of amino acids. Different sequences of the acids along a chain, however, affect the structure of a protein molecule in different ways. Forces such as hydrogen bonds, disulfide bridges, attractions between positive and negative charges, and hydrophobic (“water-fearing”) and hydrophilic (“water-loving”) linkages cause a protein molecule to coil or fold into a secondary structure, examples of which are the so-called alpha helix and the beta pleated sheet. When forces cause the molecule to become even more compact, as in globular proteins, a tertiary protein structure is formed. When a protein is made up of more than one polypeptide chain, as in hemoglobin and some enzymes, it is said to have a quaternary structure. INTERACTION WITH OTHER PROTEINS Polypeptide chains are sequenced and coiled in such a way that the hydrophobic amino acids usually face inward, giving the molecule stability, and th